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List of Publications

Medvedev, N. (Corresponding author) ; Noei, H. ; Toleikis, S. ; Ziaja, B. (Corresponding author)
Response of free-standing graphene monolayer exposed to ultrashort intense XUV pulse from free-electron laser
The journal of chemical physics 154(20), 204706 (1-8) (2021) [10.1063/5.0041261]2021 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Lipp, V. (Corresponding author) ; Milov, I. ; Medvedev, N.
Quantifying electron cascade size in various irradiated materials for free-electron laser applications
Journal of synchrotron radiation 29(2), 323 - 330 (2022) [10.1107/S1600577522000339]2022 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Ziaja, B. (Corresponding author) ; Bekx, J. J. ; Masek, M. ; Medvedev, N. ; Piekarz, P. ; Saxena, V. ; Stransky, M. ; Toleikis, S. (Corresponding author)
Tracing X-ray-induced formation of warm dense gold with Boltzmann kinetic equations
The European physical journal / D 75(8), 224 (2021) [10.1140/epjd/s10053-021-00235-z]2021 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

E, J. ; Stransky, M. ; Jurek, Z. ; Fortmann-Grote, C. ; Juha, L. ; Santra, R. ; Ziaja, B. (Corresponding author) ; Mancuso, A. P.
Effects of radiation damage and inelastic scattering on single-particle imaging of hydrated proteins with an X-ray Free-Electron Laser
Scientific reports 11(1), 17976 (2021) [10.1038/s41598-021-97142-5]2021 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Medvedev, N. (Corresponding author) ; Milov, I. ; Ziaja, B.
Structural stability and electron-phonon coupling in two-dimensional carbon allotropes at high electronic and atomic temperatures
Carbon Trends 5, 100121 (2021) [10.1016/j.cartre.2021.100121]2021 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Lipp, V. (Corresponding author) ; Tkachenko, V. ; Stransky, M. ; Aradi, B. ; Frauenheim, T. ; Ziaja, B. (Corresponding author)
Density Functional Tight Binding approach utilized to study X-ray-induced transitions in solid materials
Scientific reports 12(1), 1551 (2022) [10.1038/s41598-022-04775-1]2022 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Kapcia, K. J. (Corresponding author) ; Tkachenko, V. (Corresponding author) ; Capotondi, F. ; Lichtenstein, A. ; Molodtsov, S. ; Müller, L. ; Philippi-Kobs, A. ; Piekarz, P. ; Ziaja, B.
Modeling of ultrafast X-ray induced magnetization dynamics in magnetic multilayer systems
npj computational materials 8(1), 212 (2022) [10.1038/s41524-022-00895-4]2022 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Stransky, M. (Corresponding author) ; Jurek, Z. ; Santra, R. ; Mancuso, A. ; Ziaja, B.
Tree-code based improvement of computational performance of the x-ray–matter-interaction simulation tool XMDYN
Molecules 27(13), 4206 (2022) [10.3390/molecules27134206]2022 DBCoverage Files BibTeX | EndNote: XML, Text | RIS

Inoue, I. (Corresponding author) ; Tkachenko, V. ; Kapcia, K. J. ; Lipp, V. ; Ziaja, B. ; Inubushi, Y. ; Hara, T. ; Yabashi, M. ; Nishibori, E.
Delayed Onset and Directionality of X-Ray-Induced Atomic Displacements Observed on Subatomic Length Scales
Physical review letters 128(22), 223203 (2022) [10.1103/PhysRevLett.128.223203]2022 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Lipp, V. (Corresponding author) ; Ziaja, B. (Corresponding author)
Classical molecular dynamics simulations of surface modifications triggered by a femtosecond laser pulse
Modelling 3(3), 333 - 343 (2022) [10.3390/modelling3030021]2022 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Cichy, A. (Corresponding author) ; Kapcia, K. ; Ptok, A. (Corresponding author)
Connection between the semiconductor-superconductor transition and the spin-polarized superconducting phase in the honeycomb lattice
Physical review / B 105(21), 214510 (2022) [10.1103/PhysRevB.105.214510]2022 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Kapcia, K. (Corresponding author) ; Tkachenko, V. (Corresponding author) ; Capotondi, F. ; Lichtenstein, A. ; Molodtsov, S. ; Mueller, L. ; Philippi-Kobs, A. ; Piekarz, P. ; Ziaja, B. (Corresponding author)
Electronic processes occurring during ultrafast demagnetization of cobalt, triggered by X-ray photons tuned to Co L3 resonance
Physical review / B 107(9), 094402 (2023) [10.1103/PhysRevB.107.094402]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Rybak, M. ; Woźniak, T. (Corresponding author) ; Birowska, M. ; Dybała, F. ; Segura, A. ; Kapcia, K. ; Scharoch, P. ; Kudrawiec, R.
Stress-Tuned Optical Transitions in Layered 1T-MX$_2$ (M=Hf, Zr, Sn; X=S, Se) Crystals
Nanomaterials 12(19), 3433 (2022) [10.3390/nano12193433]2022 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Ziaja, B. (Corresponding author) ; Bekx, J. J. ; Masek, M. ; Medvedev, N. ; Lipp, V. ; Saxena, V. ; Stransky, M.
Application of Boltzmann kinetic equations to model X-ray created warm dense matter and plasma
Philosophical transactions of the Royal Society of London / Series A 381(2253), 20220216 (2023) [10.1098/rsta.2022.0216]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Mercadier, L. ; Benediktovitch, A. ; Krušič, Š. ; Kas, J. J. ; Schlappa, J. ; Agåker, M. ; Carley, R. ; Fazio, G. ; Gerasimova, N. ; Kim, Y. Y. ; Le Guyader, L. ; Mercurio, G. ; Parchenko, S. ; Rehr, J. J. ; Rubensson, J.-E. ; Serkez, S. ; Stransky, M. ; Teichmann, M. ; Yin, Z. ; Žitnik, M. ; Scherz, A. ; Ziaja, B. (Corresponding author) ; Rohringer, N.
Transient absorption of warm dense matter created by an X-ray free-electron laser
Nature physics 20(10), 1564 - 1569 (2024) [10.1038/s41567-024-02587-w]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Barański, J. (Corresponding author) ; Kapcia, K.
Dynamics of Fano-Like Resonances in Double-Quantum-Dot Systems
Acta physica Polonica / A 143(2), 143 - 147 (2023) [10.12693/APhysPolA.143.143]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Skórka, J. ; Kapcia, K. (Corresponding author) ; Jochym, P. T. ; Ptok, A.
Chiral phonons in binary compounds $A$Bi($A$ = K, Rb, Cs) with P2$_1$/c structure
Materials today / Communications 35, 105888 (2023) [10.1016/j.mtcomm.2023.105888]2023 arXiv Files Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Barański, J. ; Barańska, M. (Corresponding author) ; Zienkiewicz, T. ; Kapcia, K.
Quench dynamics of Fano-like resonances in the presence of the on-dot superconducting pairing
Scientific reports 13(1), 7639 (2023) [10.1038/s41598-023-34376-5]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Kapcia, K. (Corresponding author) ; Tkachenko, V. (Corresponding author) ; Capotondi, F. ; Lichtenstein, A. ; Molodtsov, S. ; Piekarz, P. ; Ziaja, B. (Corresponding author)
Ultrafast demagnetization in bulk nickel induced by X-ray photons tuned to Ni $M_3$ and $L_3$ absorption edges
Scientific reports 14(1), 473 (2024) [10.1038/s41598-023-50467-9]2024 OpenAccess Files Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Lipp, V. (Corresponding author) ; Inoue, I. ; Ziaja, B. (Corresponding author)
Advantages of Using Hard X-ray Photons for Ultrafast Diffraction Measurements
Photonics 10(8), 948 (2023) [10.3390/photonics10080948]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Lipp, V. (Corresponding author) ; Grünert, J. ; Liu, J. ; Ziaja, B.
Picosecond to microsecond dynamics of X-ray irradiated materials at MHz pulse repetition rate
Scientific reports 13(1), 16344 (2023) [10.1038/s41598-023-42943-z]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Ziaja, B. (Corresponding author) ; Stransky, M. ; Kapcia, K. ; Inoue, I. (Corresponding author)
Modeling femtosecond reduction of atomic scattering factors in X-ray excited silicon with Boltzmann kinetic equations
Atoms 11(12), 154 (2023) [10.3390/atoms11120154]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

E, J. (Corresponding author) ; Stransky, M. ; Shen, Z. ; Jurek, Z. ; Fortmann-Grote, C. ; Bean, R. ; Santra, R. ; Ziaja, B. ; Mancuso, A. (Corresponding author)
Water layer and radiation damage effects on the orientation recovery of proteins in single-particle imaging at an X-ray free-electron laser
Scientific reports 13(1), 16359 (2023) [10.1038/s41598-023-43298-1]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Inoue, I. (Corresponding author) ; Yamada, J. ; Kapcia, K. J. ; Stransky, M. ; Tkachenko, V. ; Jurek, Z. ; Inoue, T. ; Osaka, T. ; Inubushi, Y. ; Ito, A. ; Tanaka, Y. ; Matsuyama, S. ; Yamauchi, K. ; Yabashi, M. ; Ziaja, B. (Corresponding author)
Femtosecond Reduction of Atomic Scattering Factors Triggered by Intense X-Ray Pulse
Physical review letters 131(16), 163201 (2023) [10.1103/PhysRevLett.131.163201]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Heimann, P. (Corresponding author) ; Hartley, N. J. ; Inoue, I. ; Tkachenko, V. (Corresponding author) ; Antoine, A. ; Dorchies, F. ; Falcone, R. ; Gaudin, J. ; Höppner, H. ; Inubushi, Y. ; Kapcia, K. J. ; Lee, H. J. ; Lipp, V. ; Martinez, P. ; Medvedev, N. ; Tavella, F. ; Toleikis, S. ; Yabashi, M. ; Yabuuchi, T. ; Yamada, J. ; Ziaja, B.
Non-thermal structural transformation of diamond driven by x-rays
Structural dynamics 10(5), 054502 (2023) [10.1063/4.0000193]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Biernacka, M. ; Butkiewicz, P. ; Kapcia, K. ; Olszewski, W. (Corresponding author) ; Satuła, D. ; Szafrański, M. ; Wojtyniak, M. ; Szymański, K. R.
Electrical polarization switching in bulk single-crystal GaFeO$_3$
Physical review / B 108(19), 195101 (2023) [10.1103/PhysRevB.108.195101]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Hartley, N. J. (Corresponding author) ; Grenzer, J. ; Lu, W. ; Huang, L. G. ; Inubushi, Y. ; Kamimura, N. ; Katagiri, K. ; Kodama, R. ; Kon, A. ; Lipp, V. ; Makita, M. ; Matsuoka, T. ; Medvedev, N. ; Nakajima, S. ; Ozaki, N. ; Pikuz, T. ; Rode, A. V. ; Sagae, D. ; Schuster, A. K. ; Tono, K. ; Voigt, K. ; Vorberger, J. ; Yabuuchi, T. ; Kraus, D.
Corrigendum to ultrafast anisotropic disordering in graphite driven by intense hard X-ray pulses
High energy density physics 46(46), 101022 (2023) [10.1016/j.hedp.2022.101022]2023 Files BibTeX | EndNote: XML, Text | RIS

Barański, J. (Corresponding author) ; Barańska, M. ; Zienkiewicz, T. ; Tomaszewska, J. ; Kapcia, K.
Continuous unitary transformation approach to the Kondo–Majorana interplay
Journal of magnetism and magnetic materials 588, 171464 (2023) [10.1016/j.jmmm.2023.171464]2023 OpenAccess Files Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Cichy, A. (Corresponding author) ; Kapcia, K. ; Ptok, A.
Spin-polarized superconducting phase in semiconducting system with next-nearest-neighbor hopping on the honeycomb lattice
Journal of magnetism and magnetic materials 589, 171522 (2024) [10.1016/j.jmmm.2023.171522]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Stransky, M. ; Lane, T. (Corresponding author) ; Gorel, A. ; Boutet, S. ; Schlichting, I. (Corresponding author) ; Mancuso, A. ; Jurek, Z. ; Ziaja, B. (Corresponding author)
Ionization by XFEL radiation produces distinct structure in liquid water
Communications Physics 7(1), 281 (2024) [10.1038/s42005-024-01768-6]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Stransky, M. (Corresponding author) ; E, J. ; Jurek, Z. ; Santra, R. ; Bean, R. ; Ziaja, B. ; Mancuso, A. (Corresponding author)
Computational study of diffraction image formation from XFEL irradiated single ribosome molecule
Scientific reports 14, 10617 (2024) [10.1038/s41598-024-61314-w]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Inoue, I. (Corresponding author) ; Ziaja, B. (Corresponding author)
Perspective for in-volume machining of solid materials by undersurface focusing of x-ray pulses
Journal of physics / B 57(19), 192501 (2024) [10.1088/1361-6455/ad7551]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Inoue, I. (Corresponding author) ; Tkachenko, V. (Corresponding author) ; Kubota, Y. ; Dorchies, F. ; Hara, T. ; Höppner, H. ; Inubushi, Y. ; Kapcia, K. J. ; Lee, H. J. ; Lipp, V. ; Martinez, P. ; Nishibori, E. ; Osaka, T. ; Toleikis, S. ; Yamada, J. ; Yabashi, M. ; Ziaja, B. ; Heimann, P. A. (Corresponding author)
Interplay of thermal and nonthermal effects in x-ray-induced ultrafast melting
Physical review / B 110(10), L100102 (2024) [10.1103/PhysRevB.110.L100102]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

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